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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
HNSC rs7438763 chr4:110763413 A/G 5.8E-5 402 13.13 16.37 16.5 KM Plot
HNSC rs74533247 chr18:42809318 A/G 2.73E-5 410 16.68 13.07 4.3 KM Plot
HNSC rs75228701 chr11:34997314 A/G 1.62E-5 410 16.27 16.3 9.2 KM Plot
HNSC rs75418363 chr6:74339221 T/C 6.45E-5 407 17.13 12.57 13.43 KM Plot
HNSC rs7559192 chr2:7866845 G/A 4.5E-5 401 16.87 13.98 6.87 KM Plot
HNSC rs7561906 chr2:218312731 C/T 4.01E-5 408 16.08 19.17 10.57 KM Plot
HNSC rs7562072 chr2:218312691 G/T 4.01E-5 408 16.08 19.17 10.57 KM Plot
HNSC rs7562091 chr2:218312748 G/A 4.01E-5 408 16.08 19.17 10.57 KM Plot
HNSC rs7562410 chr2:218313048 G/A 4.6E-5 405 16.08 19.2 10.57 KM Plot
HNSC rs75642971 chr18:42812470 A/G 2.91E-5 408 16.92 13.07 4.3 KM Plot
HNSC rs7588296 chr2:218312698 A/G 4.01E-5 408 16.08 19.17 10.57 KM Plot
HNSC rs7588626 chr2:218312978 A/G 4.6E-5 405 16.08 19.2 10.57 KM Plot
HNSC rs762271 chr22:24448082 T/C 1.41E-6 410 5.68 14.47 16.35 KM Plot
HNSC rs762273 chr22:24459438 T/C 1.47E-6 411 5.68 14.67 16.3 KM Plot
HNSC rs76376425 chr22:24523177 C/T 2.12E-6 411 16.33 17.07 8.63 KM Plot